STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I3E0_VITVIUncharacterized protein. (112 aa)    
Predicted Functional Partners:
F6H7I5_VITVI
Lipoyl-binding domain-containing protein.
  
 0.968
D7SYC1_VITVI
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.933
F6HN88_VITVI
Transket_pyr domain-containing protein.
  
 0.928
D7SLN4_VITVI
Transket_pyr domain-containing protein.
  
 0.878
F6GY10_VITVI
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.871
D7TCM2_VITVI
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.870
D7TZW9_VITVI
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.870
F6HFN8_VITVI
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.870
F6I5U2_VITVI
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.870
VITISV_037293
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 0.865
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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