STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I5P4_VITVIUncharacterized protein. (626 aa)    
Predicted Functional Partners:
F6I569_VITVI
Uncharacterized protein.
  
  0.526
26N20_60
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.510
F6I624_VITVI
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
  0.510
D7UBS0_VITVI
WD_REPEATS_REGION domain-containing protein.
    
  0.508
F6HAX1_VITVI
Sas10 domain-containing protein.
    
  0.507
D7U2A7_VITVI
Uncharacterized protein.
    
  0.503
F6GYH0_VITVI
Uncharacterized protein.
  
     0.490
F6HF03_VITVI
Uncharacterized protein.
   
 
  0.482
D7T0V5_VITVI
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
  0.481
F6HQZ3_VITVI
Uncharacterized protein.
  
     0.450
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (18%) [HD]