STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g3950U2 snRNP component IST3. (170 aa)    
Predicted Functional Partners:
AWRI3580_g2819
Uncharacterized protein.
   
 0.995
AWRI3580_g152
U2 snRNP component.
    
 
 0.980
AWRI3580_g3243
CPSF_A domain-containing protein.
    
 
 0.977
AWRI3580_g3036
Pre-mRNA-splicing factor CEF1.
    
 
 0.977
AWRI3580_g3675
Pre-mRNA-splicing helicase BRR2.
    
 
 0.974
AWRI3580_g2339
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2.
    
 0.879
AWRI3580_g697
U1-type domain-containing protein.
    
 
 0.838
AWRI3580_g2274
Uncharacterized protein.
    
 
 0.837
AWRI3580_g164
Pre-mRNA-splicing factor CWC22.
   
 
 0.810
AWRI3580_g3555
Pre-mRNA-splicing factor PRP9.
    
 
 0.782
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.