STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g3836Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (182 aa)    
Predicted Functional Partners:
AWRI3580_g1055
Translation machinery-associated protein 22.
   
 
 0.979
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.903
AWRI3580_g477
Eukaryotic translation initiation factor eIF-1.
   
 
 0.766
AWRI3580_g2682
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
 
 
    0.613
AWRI3580_g2213
40S ribosomal protein S28-B.
    
   0.548
AWRI3580_g3877
60S ribosomal protein L18-B.
 
      0.516
AWRI3580_g2478
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.494
AWRI3580_g178
U3 small nucleolar ribonucleoprotein IMP3.
   
 
 0.491
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.485
AWRI3580_g27
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.485
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.