STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g3640Uncharacterized protein. (828 aa)    
Predicted Functional Partners:
AWRI3580_g3833
Exocyst complex component SEC3.
   
 0.999
AWRI3580_g2805
Exocyst complex component SEC6.
   
 0.999
AWRI3580_g813
Exocyst complex component SEC15.
    
 0.999
AWRI3580_g2929
Exocyst complex protein EXO70.
    
 0.974
AWRI3580_g492
Rab guanine nucleotide exchange factor SEC2.
    
 0.781
AWRI3580_g3320
Ras-related protein SEC4.
   
 0.765
AWRI3580_g815
GTP-binding protein YPT31/YPT8.
    
 0.757
AWRI3580_g2367
Uncharacterized protein.
   
 0.714
AWRI3580_g3779
Ras-related protein RSR1.
    
 0.665
AWRI3580_g1763
Ras-like protein 1.
    
 0.665
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.