STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g3656Nucleoporin GLE1. (428 aa)    
Predicted Functional Partners:
AWRI3580_g1760
Nucleoporin NSP1.
    
 0.999
AWRI3580_g1000
Nucleoporin NSP1.
    
 0.999
AWRI3580_g3356
Nucleoporin NUP2.
    
 0.997
AWRI3580_g1426
ATP-dependent RNA helicase DBP5.
    
 
 0.937
AWRI3580_g2552
Nucleoporin GLE2.
   
 0.912
AWRI3580_g2557
Nucleoporin.
   
 0.893
AWRI3580_g1861
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.868
AWRI3580_g3989
Uncharacterized protein.
   
 0.836
AWRI3580_g1001
Nucleoporin.
    
 0.814
AWRI3580_g3013
mRNA export factor MEX67.
    
 0.809
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.