STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g3628Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
AWRI3580_g3428
Transcriptional activator SPT7.
    
 0.982
AWRI3580_g2350
Transcriptional coactivator HFI1/ADA1.
    
 0.943
AWRI3580_g1111
Transcription initiation factor TFIID subunit 12.
   
 0.931
AWRI3580_g1208
Transcription initiation factor TFIID subunit 5.
   
 0.920
AWRI3580_g2157
SCA7 domain-containing protein.
    
 0.917
AWRI3580_g2129
Transcription initiation factor TFIID subunit 9.
    
 0.915
AWRI3580_g2151
Transcription initiation factor TFIID subunit 6.
    
 0.912
AWRI3580_g605
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 
 0.868
AWRI3580_g1381
Protein SPT3.
    
 
 0.865
AWRI3580_g1081
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.812
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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