STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g2769Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (266 aa)    
Predicted Functional Partners:
AWRI3580_g3022
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.722
AWRI3580_g1553
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
 
0.661
AWRI3580_g2116
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.601
AWRI3580_g2476
Ubiquitin-conjugating enzyme E2 6.
 
      0.474
AWRI3580_g1450
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.440
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.