STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g2694t-SNARE affecting a late Golgi compartment protein 2; Belongs to the syntaxin family. (313 aa)    
Predicted Functional Partners:
AWRI3580_g2281
t-SNARE VTI1.
   
 0.998
AWRI3580_g879
t-SNARE affecting a late Golgi compartment protein 1.
    
 0.998
AWRI3580_g2071
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.986
AWRI3580_g54
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.958
AWRI3580_g3151
Alpha-soluble NSF attachment protein.
    
 0.939
AWRI3580_g3230
Synaptobrevin 2.
    
 0.934
AWRI3580_g816
Uncharacterized protein.
    
 0.870
AWRI3580_g1598
Uncharacterized protein.
    
 0.854
AWRI3580_g1821
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.826
AWRI3580_g718
Vacuolar protein sorting-associated protein 54.
    
 0.816
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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