STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g1661Axial budding pattern protein 2. (736 aa)    
Predicted Functional Partners:
AWRI3580_g3084
Urea amidolyase.
    
 0.604
AWRI3580_g469
Bud site selection protein 5.
    
 0.535
AWRI3580_g3659
Bud site selection protein RAX2.
   
 0.497
AWRI3580_g3340
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.469
AWRI3580_g2496
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.458
AWRI3580_g3102
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.458
AWRI3580_g2307
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.458
AWRI3580_g2851
Chitin deacetylase 2.
    
 0.452
AWRI3580_g3093
Glycerophosphodiester phosphodiesterase GDE1.
   
 0.441
AWRI3580_g3068
GRIP domain-containing protein RUD3.
    
  0.436
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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