STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g2198Imitation switch two complex protein 1. (1281 aa)    
Predicted Functional Partners:
AWRI3580_g3501
ISWI chromatin-remodeling complex ATPase ISW2.
    
 0.855
AWRI3580_g2085
ISWI chromatin-remodeling complex ATPase ISW1.
    
 0.855
AWRI3580_g1156
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.814
AWRI3580_g1475
Putative ATP-dependent helicase IRC5.
    
 0.806
AWRI3580_g152
U2 snRNP component.
   
 0.754
AWRI3580_g2248
DNA polymerase V.
    
 0.734
AWRI3580_g2940
DNA repair and recombination protein RAD26.
    
 0.685
AWRI3580_g3664
Chromo domain-containing protein 1.
   
 0.677
AWRI3580_g1842
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.644
AWRI3580_g1455
Uncharacterized protein.
   
 0.623
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.