STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g2262Negative growth regulatory protein NGR1. (567 aa)    
Predicted Functional Partners:
AWRI3580_g3654
U1 small nuclear ribonucleoprotein component PRP42.
   
 
 0.843
AWRI3580_g2299
Nuclear cap-binding protein complex subunit 1.
    
 0.779
AWRI3580_g2076
Nuclear cap-binding protein subunit 2.
    
 0.776
AWRI3580_g152
U2 snRNP component.
   
 0.757
AWRI3580_g783
Nucleolar protein 3.
    
 0.750
AWRI3580_g4027
Sm domain-containing protein.
   
  0.749
AWRI3580_g1524
RNA annealing protein YRA1.
   
 0.749
AWRI3580_g255
PAB1-binding protein 1.
    
 
 0.747
AWRI3580_g3243
CPSF_A domain-containing protein.
    
  0.745
AWRI3580_g1124
Branchpoint-bridging protein.
    
 
 0.720
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.