STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g1574PAB-dependent poly(A)-specific ribonuclease subunit PAN3. (587 aa)    
Predicted Functional Partners:
AWRI3580_g2021
PAB-dependent poly(A)-specific ribonuclease subunit PAN2.
    
 0.999
AWRI3580_g3666
Polyadenylate-binding protein, cytoplasmic and nuclear.
    
 0.799
AWRI3580_g2947
Protein PES4.
    
 0.799
AWRI3580_g2419
RNA exonuclease 4.
    
 0.764
AWRI3580_g1115
RNA exonuclease 3.
    
 0.764
AWRI3580_g78
RNA exonuclease 1.
    
 0.764
AWRI3580_g3638
Sister chromatid cohesion protein 2.
   
   0.615
AWRI3580_g712
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
  0.492
AWRI3580_g1982
Glucose-repressible alcohol dehydrogenase transcriptional effector.
   
 
 0.487
AWRI3580_g1936
Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.
    
  0.485
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.