STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g1200Protein CCC1. (307 aa)    
Predicted Functional Partners:
AWRI3580_g2667
Glutamate synthase [NADH].
  
 
 0.748
AWRI3580_g2465
Glutamine synthetase.
    
  0.648
AWRI3580_g1931
Mitochondrial RNA-splicing protein MRS4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.536
AWRI3580_g1075
Acetyl-coenzyme A synthetase.
      0.527
AWRI3580_g3790
Tryptophan synthase.
       0.456
AWRI3580_g3292
Iron-sulfur assembly protein 1.
   
  
 0.418
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.