STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g887Protein AHC1. (505 aa)    
Predicted Functional Partners:
AWRI3580_g2571
SAGA-associated factor 29.
   
 0.733
AWRI3580_g1460
SWR1-complex protein 4.
   
 0.717
AWRI3580_g3428
Transcriptional activator SPT7.
    
 0.685
AWRI3580_g1397
Transcription initiation factor IIF subunit beta.
   
 0.663
AWRI3580_g2151
Transcription initiation factor TFIID subunit 6.
    
 0.659
AWRI3580_g3635
Chromatin-remodeling complexes subunit NGG1.
    
 0.653
AWRI3580_g1111
Transcription initiation factor TFIID subunit 12.
    
 0.648
AWRI3580_g222
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.646
AWRI3580_g2230
DNA-directed RNA polymerase II subunit RPB11.
   
 0.642
AWRI3580_g1412
Transcription elongation factor S-II.
    
 0.626
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.