STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3580_g38Protein STB5. (695 aa)    
Predicted Functional Partners:
AWRI3580_g1790
Pre-rRNA-processing protein IPI3.
   
 0.533
AWRI3580_g845
Pre-rRNA-processing protein IPI1.
    
 0.501
AWRI3580_g450
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.489
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.467
AWRI3580_g4022
EF-hand domain-containing protein.
    
  0.466
AWRI3580_g3393
Calmodulin; Belongs to the calmodulin family.
    
  0.466
AWRI3580_g2124
Myosin light chain 1.
    
  0.466
AWRI3580_g3093
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.457
AWRI3580_g3870
Uncharacterized protein.
    
  0.453
AWRI3580_g3775
60S ribosomal protein L30.
    
  0.426
Your Current Organism:
Hanseniaspora uvarum
NCBI taxonomy Id: 29833
Other names: ATCC 32369, CBS 314, DBVPG 6718, H. uvarum, Hanseniaspora apiculata, IFO 10833, Kloeckera apiculata, Kloeckeraspora uvarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.