Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AWRI3580_g1009 | AWRI3580_g1274 | A0A1E5RY28 | A0A1E5RUF3 | Proteasome-interacting protein CIC1. | Nucleolar complex protein 2. | 0.981 |
AWRI3580_g1009 | AWRI3580_g1456 | A0A1E5RY28 | A0A1E5RUU5 | Proteasome-interacting protein CIC1. | Ribosome biogenesis protein RPF2. | 0.977 |
AWRI3580_g1009 | AWRI3580_g1712 | A0A1E5RY28 | A0A1E5RQA0 | Proteasome-interacting protein CIC1. | Ribosome biogenesis protein 15. | 0.997 |
AWRI3580_g1009 | AWRI3580_g1739 | A0A1E5RY28 | A0A1E5RQP8 | Proteasome-interacting protein CIC1. | 25S rRNA (Cytosine(2870)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.986 |
AWRI3580_g1009 | AWRI3580_g2172 | A0A1E5RY28 | A0A1E5RQB3 | Proteasome-interacting protein CIC1. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.959 |
AWRI3580_g1009 | AWRI3580_g3553 | A0A1E5RY28 | A0A1E5R9R1 | Proteasome-interacting protein CIC1. | Ribosome biogenesis protein BRX1. | 0.972 |
AWRI3580_g1009 | AWRI3580_g3832 | A0A1E5RY28 | A0A1E5R4G0 | Proteasome-interacting protein CIC1. | Nuclear GTP-binding protein NUG1. | 0.983 |
AWRI3580_g1009 | AWRI3580_g436 | A0A1E5RY28 | A0A1E5S242 | Proteasome-interacting protein CIC1. | rRNA-processing protein EBP2. | 0.983 |
AWRI3580_g1009 | ERB1 | A0A1E5RY28 | A0A1E5S172 | Proteasome-interacting protein CIC1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.974 |
AWRI3580_g1009 | NOP7 | A0A1E5RY28 | A0A1E5RQJ8 | Proteasome-interacting protein CIC1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.976 |
AWRI3580_g1274 | AWRI3580_g1009 | A0A1E5RUF3 | A0A1E5RY28 | Nucleolar complex protein 2. | Proteasome-interacting protein CIC1. | 0.981 |
AWRI3580_g1274 | AWRI3580_g1456 | A0A1E5RUF3 | A0A1E5RUU5 | Nucleolar complex protein 2. | Ribosome biogenesis protein RPF2. | 0.973 |
AWRI3580_g1274 | AWRI3580_g1712 | A0A1E5RUF3 | A0A1E5RQA0 | Nucleolar complex protein 2. | Ribosome biogenesis protein 15. | 0.990 |
AWRI3580_g1274 | AWRI3580_g1739 | A0A1E5RUF3 | A0A1E5RQP8 | Nucleolar complex protein 2. | 25S rRNA (Cytosine(2870)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.992 |
AWRI3580_g1274 | AWRI3580_g2172 | A0A1E5RUF3 | A0A1E5RQB3 | Nucleolar complex protein 2. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.944 |
AWRI3580_g1274 | AWRI3580_g3553 | A0A1E5RUF3 | A0A1E5R9R1 | Nucleolar complex protein 2. | Ribosome biogenesis protein BRX1. | 0.982 |
AWRI3580_g1274 | AWRI3580_g3832 | A0A1E5RUF3 | A0A1E5R4G0 | Nucleolar complex protein 2. | Nuclear GTP-binding protein NUG1. | 0.989 |
AWRI3580_g1274 | AWRI3580_g436 | A0A1E5RUF3 | A0A1E5S242 | Nucleolar complex protein 2. | rRNA-processing protein EBP2. | 0.982 |
AWRI3580_g1274 | ERB1 | A0A1E5RUF3 | A0A1E5S172 | Nucleolar complex protein 2. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.989 |
AWRI3580_g1274 | NOP7 | A0A1E5RUF3 | A0A1E5RQJ8 | Nucleolar complex protein 2. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.991 |
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