Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PBPRA0045Hypothetical flagellar hook control length protein; Predicted by orpheus program; predicted by glimmer program. (424 aa)    
Predicted Functional Partners:
VV0968
Hypothetical FlgJ, Muramidase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.977
PBPRA0046
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.963
YPO0741
Hypothetical LafC; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.956
CV2997
Hypothetical flagellar assembly protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.938
FLIH
Hypothetical polar flagellar assembly protein, FliH; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.938
Y3465
Hypothetical FliE-like hook basal body protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.927
PBPRA0928
Hypothetical polar flagellar hook-length control protein FliK; Predicted by orpheus program; predicted by glimmer program.
  
  
 
0.927
EBIG853
Hypothetical flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.916
PA4954
Hypothetical MotA flagellar motor transmembrane protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.913
YPO0729
Putative flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.907
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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