STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
STM3730Putative DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (413 aa)    
Predicted Functional Partners:
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
 
 0.958
PA4279
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.943
STY3083
Putative MazG protein; Predicted by orpheus program; predicted by glimmer program.
  
  
  0.916
STY0441
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
     
  0.900
SF0130
Putative Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
 
  
 0.898
C2948
Putative cysteine synthase A; Predicted by orpheus program; predicted by glimmer program; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.821
SCO1028
Putative cysteine synthase/cystathionine (CysK); Predicted by orpheus program; predicted by glimmer program.
    
 0.821
S3256
Putative cystathionine beta-lyase; Predicted by orpheus program; predicted by glimmer program.
   
 
  0.804
BH3313
Putative PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; Predicted by orpheus program; predicted by glimmer program.
    
  0.803
ASPC-1
Putative amino acid biosynthesisaminotransferase; Predicted by orpheus program; predicted by glimmer program.
    
  0.801
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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