Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VP2743Hypothetical DamX-related protein; Predicted by orpheus program; predicted by glimmer program. (502 aa)    
Predicted Functional Partners:
aroB
Putative 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
  
    0.862
VV2950
Hypothetical MSHA biogenesis protein MshI; Predicted by orpheus program; predicted by glimmer program.
 
     0.746
aroK
Putative shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
    0.734
VV10298
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.734
VV10234
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.730
VV21143
Putative outer membrane protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.718
VV11731
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.711
VV10722
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.703
VC2207
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.681
VC2058
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.673
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.