| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C3138 | ECS0015 | PBPRA0694 | PBPRA0698 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | 0.737 |
| C3138 | PBPRA1578 | PBPRA0694 | PBPRA1578 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.884 |
| C3138 | PPNK | PBPRA0694 | PBPRA0695 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.720 |
| C3138 | RECA | PBPRA0694 | PBPRA3068 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.931 |
| C3138 | SF3891 | PBPRA0694 | PBPRA3513 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative ATP-dependent DNA helicase Rep; Predicted by orpheus program; predicted by glimmer program. | 0.711 |
| C3138 | STY2088 | PBPRA0694 | PBPRA3003 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative DNA damage-inducible gene in SOSregulon, dependent on cyclic AMP and H-NS; Predicted by orpheus program; predicted by glimmer program. | 0.810 |
| C3138 | UMUD | PBPRA0694 | PBPRB0973 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S24 family. | 0.839 |
| C3138 | XSEA | PBPRA0694 | PBPRA0779 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.721 |
| C3138 | lexA | PBPRA0694 | PBPRA0165 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.889 |
| C3138 | ruvA | PBPRA0694 | PBPRA1116 | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Putative holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.773 |
| ECS0015 | C3138 | PBPRA0698 | PBPRA0694 | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.737 |
| ECS0015 | PPNK | PBPRA0698 | PBPRA0695 | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.428 |
| ECS0015 | RECA | PBPRA0698 | PBPRA3068 | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | Putative RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.531 |
| ECS0015 | SF3891 | PBPRA0698 | PBPRA3513 | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | Putative ATP-dependent DNA helicase Rep; Predicted by orpheus program; predicted by glimmer program. | 0.497 |
| ECS0015 | XSEA | PBPRA0698 | PBPRA0779 | Putative DnaJ protein, DnaJ-class molecular chaperone with C-terminal Zn finger domain; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cyc [...] | Putative exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.450 |
| PBPRA1578 | C3138 | PBPRA1578 | PBPRA0694 | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.884 |
| PBPRA1578 | RECA | PBPRA1578 | PBPRA3068 | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Putative RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.637 |
| PBPRA1578 | STY2088 | PBPRA1578 | PBPRA3003 | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Putative DNA damage-inducible gene in SOSregulon, dependent on cyclic AMP and H-NS; Predicted by orpheus program; predicted by glimmer program. | 0.849 |
| PBPRA1578 | UMUD | PBPRA1578 | PBPRB0973 | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the peptidase S24 family. | 0.697 |
| PBPRA1578 | lexA | PBPRA1578 | PBPRA0165 | Hypothetical SulA, SOS-response cell division inhibitor, blocks FtsZring formation; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Putative LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.697 |