STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
YPO2911Putative nitrogen regulatory protein P-II; Predicted by orpheus program; predicted by glimmer program; Belongs to the P(II) protein family. (112 aa)    
Predicted Functional Partners:
AMT-2
Putative ammonium transporter; Predicted by orpheus program; predicted by glimmer program.
 
 0.996
MK0053
Putative ammonium permease; Predicted by orpheus program; predicted by glimmer program.
 
 0.995
S0160
Putative protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
 
 
 0.990
GLNL
Putative nitrogen regulation protein; Predicted by orpheus program; predicted by glimmer program.
  
 0.988
ARGA
Putative N-acetylglutamate synthase; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.711
argB
Putative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.704
AGR_L_30-2
Putative ABC transporter substrate-binding protein; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.696
PLU0237
Putative glutamate-ammonia ligase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.609
C3973
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.548
BH1728
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.548
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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