node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NUSB | SO0219 | PBPRA0801 | PBPRA3437 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | 0.886 |
NUSB | SO3466 | PBPRA0801 | PBPRA0800 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (Lumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.976 |
NUSB | SUHB | PBPRA0801 | PBPRA0747 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative inositol monophosphate family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the inositol monophosphatase superfamily. | 0.826 |
NUSB | T3205 | PBPRA0801 | PBPRA0611 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative transcription pausing L factor; Participates in both transcription termination and antitermination. | 0.923 |
NUSB | fmt | PBPRA0801 | PBPRA3580 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.892 |
NUSB | rpoA | PBPRA0801 | PBPRA0345 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.838 |
NUSB | rpoB | PBPRA0801 | PBPRA3432 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.842 |
NUSB | rpoZ | PBPRA0801 | PBPRA0190 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.891 |
NUSB | rpsD | PBPRA0801 | PBPRA0344 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.802 |
NUSB | rpsJ | PBPRA0801 | PBPRA0319 | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.873 |
SO0219 | NUSB | PBPRA3437 | PBPRA0801 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.886 |
SO0219 | SUHB | PBPRA3437 | PBPRA0747 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative inositol monophosphate family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the inositol monophosphatase superfamily. | 0.858 |
SO0219 | T3205 | PBPRA3437 | PBPRA0611 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative transcription pausing L factor; Participates in both transcription termination and antitermination. | 0.993 |
SO0219 | fmt | PBPRA3437 | PBPRA3580 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.543 |
SO0219 | rpoA | PBPRA3437 | PBPRA0345 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
SO0219 | rpoB | PBPRA3437 | PBPRA3432 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
SO0219 | rpoZ | PBPRA3437 | PBPRA0190 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.879 |
SO0219 | rpsD | PBPRA3437 | PBPRA0344 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.984 |
SO0219 | rpsJ | PBPRA3437 | PBPRA0319 | Putative transcription antiterminator protein; Participates in transcription elongation, termination and antitermination. | Putative ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.988 |
SO3466 | NUSB | PBPRA0800 | PBPRA0801 | Putative 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (Lumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | Putative NusB protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.976 |