Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VP0770Putative chaperone FlgN; Predicted by orpheus program; predicted by glimmer program. (142 aa)    
Predicted Functional Partners:
FLGM
Putative negative regulator of flagellin synthesis FlgM; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.964
VPA0273
Hypothetical flagellar hook-associated protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.924
VV0969
Hypothetical flagellar hook-associated protein FlgM; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.
  
 
 0.924
PBPRA0027
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
     
  0.900
VV0957
Putative FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
  
 0.897
VV0968
Hypothetical FlgJ, Muramidase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.869
PA1077
Putative polar flagellar FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.843
VPA0274
Hypothetical FlgL flagellar hook-associated protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.839
VV0970
Hypothetical flagellar hook-associated protein FlgL; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.839
PSPTO193
Putative flagellar basal body rod protein FlgC; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family.
  
  
 0.827
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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