STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
VV0969Hypothetical flagellar hook-associated protein FlgM; Predicted by orpheus program; predicted by glimmer program; Belongs to the flagella basal body rod proteins family. (626 aa)    
Predicted Functional Partners:
VV0970
Hypothetical flagellar hook-associated protein FlgL; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.997
PBPRA0915
Putative flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.992
VPA0274
Hypothetical FlgL flagellar hook-associated protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.991
PBPRA0042
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.990
PSPTO193-3
Putative flagellar hook protein FlgE; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.987
VV0968
Hypothetical FlgJ, Muramidase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.986
PA1080
Hypothetical flagellar hook protein FlgE; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.984
STY2169
Putative polar flagellar protein FlaJ; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.978
VV0971
Putative flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.976
YPO0729
Putative flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.975
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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