Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO3224Putative flagellar protein FliJ; Predicted by orpheus program; predicted by glimmer program. (146 aa)    
Predicted Functional Partners:
PLU1945
Putative polar flagellum-specific ATP synthase FliI; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.991
PBPRA0928
Hypothetical polar flagellar hook-length control protein FliK; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.983
FLIH
Hypothetical polar flagellar assembly protein, FliH; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.980
SO3225
Putative FliI, flagellum-specific ATP synthase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.975
XAC1947
Putative flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.974
SO3228
Putative polar flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.971
SO3229
Putative flagellar hook-basal body protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.969
SO3222
Hypothetical flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.967
XAC1953
Putative polar flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.956
CV2997
Hypothetical flagellar assembly protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.955
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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