STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S0421Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (174 aa)    
Predicted Functional Partners:
SF4078
Putative osphoribosylaminoimidazolecarboxamideformyltransferase/IMP cyclohydrolase; Predicted by orpheus program; predicted by glimmer program.
 
 0.985
T1688
Putative adenylosuccinate lyase; Predicted by orpheus program; predicted by glimmer program; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.979
S0426
Putative adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
 0.938
SAV5577
Putative adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
   
 0.937
SAV5577-2
Putative adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
   
 0.937
surE
Putative acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.928
C5468
Putative purine nucleoside phosphorylase; Predicted by orpheus program; predicted by glimmer program.
    
 0.912
STY3108
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
    
 0.912
DEOD
Putative purine nucleoside phosphorylase; Predicted by orpheus program; predicted by glimmer program.
    
 0.912
C3115
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.911
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.