Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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RSC2632Putative ABC-type cobalt transport system, ATPase component; Predicted by orpheus program; predicted by glimmer program. (237 aa)    
Predicted Functional Partners:
RSC2631
Putative ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.
 
  
  0.976
YDCF
Putative ABC transporter, membrane-spanning permease; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.975
BP1480
Hypothetical extracellular tungstate binding protein; Predicted by orpheus program; predicted by glimmer program.
 
  
  0.955
SO4723
Putative molybdopterin biosynthesis MoeAprotein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.892
MOBAB
Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
    0.866
LL0324
Putative membrane protein; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.758
SO4717
Putative sensor histidine kinase; Predicted by orpheus program; predicted by glimmer program.
 
     0.746
CV1487
Hypothetical ATP-binding protein ofiron/siderophore ABC transporter; Predicted by orpheus program; predicted by glimmer program.
 
     0.733
truA
Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.723
SO4504
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
    0.707
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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