STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VPA1449-2Hypothetical Methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program. (521 aa)    
Predicted Functional Partners:
PP4393
Putative chemotaxis CheV; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.885
CHEV-3
Putative chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.884
VP0773
Hypothetical chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.883
PSPTO198
Putative chemotaxis protein CheA; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.879
PBPRA0774
Hypothetical chemotaxis histidine protein kinase, CheA; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.878
PA1464
Putative purine-binding chemotaxis protein CheW; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.871
PSPTO198-2
Protein-glutamate methylesterase, chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.828
XAC1888
Protein-glutamate methylesterase/protein-glutamine glutaminase 1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.821
PSPTO192
Putative chemotaxis protein methyltransferase CheR; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.821
S2024
Hypothetical chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 
 0.820
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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