Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T4608Hypothetical pyruvate formate lyase activating enzyme; Predicted by orpheus program; predicted by glimmer program. (318 aa)    
Predicted Functional Partners:
YPO1383
Putative formate acetyltransferase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.938
SF4412
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.914
ADHE
Putative alcohol dehydrogenase/acetaldehyde dehydrogenase; Predicted by orpheus program; predicted by glimmer program; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.831
S2814
Putative formate acetyl transferase-related protein; Acts as a radical domain for damaged PFL and possibly other radical proteins.
  
     0.772
ECS2000
Putative pyruvate oxidoreductase; Predicted by orpheus program; predicted by glimmer program.
     
 0.596
YIAY
Putative alcohol dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.502
CT0951
Putative iron-containing alcohol dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.484
RS02318
Hypothetical methanol dehydrogenase,NAD-dependent; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.417
T1155
Hypothetical hemolysin; Predicted by orpheus program; predicted by glimmer program.
       0.411
Z3559
Putative phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.409
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.