STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
folEGTP cyclohydrolase I; Predicted by orpheus program; predicted by glimmer program. (217 aa)    
Predicted Functional Partners:
STY0208
Putative 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; Predicted by orpheus program; predicted by glimmer program.
  
 0.992
T3212
Putative dihydropteroate synthase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.972
Z4411
Putative Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
  
 0.970
VPA0006
Putative GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
 
 
 0.945
SO3467
Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.936
SCO2687
Hypothetical GTP cyclohydrolase II; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.931
PLU2474
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.931
S0772
Putative molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.921
XAC0686
Hypothetical 2-amino-4-hydroxy-6-hydroxymethyldihydr opteridine pyrophosphokinase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.919
CSAP
Hypothetical alkaline phosphatase; Predicted by orpheus program; predicted by glimmer program.
     
  0.900
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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