STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBPRA2139Hypothetical protein; Predicted by orpheus program; predicted by glimmer program. (360 aa)    
Predicted Functional Partners:
VVA0122
Hypothetical maltoporin; Predicted by orpheus program; predicted by glimmer program.
  
   
 0.821
VVA0053
Putative maltoporin; Predicted by orpheus program; predicted by glimmer program.
  
   
 0.806
SF3636
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.704
PBPRB0266
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.698
VC1895
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.692
VPA0052
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.684
STM1377
Putative lipoprotein; Predicted by orpheus program; predicted by glimmer program.
  
   
 0.674
PBPRB0265
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.666
HD1486
Putative Zn-ribbon-containing protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.644
STY3782
Conserved hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.639
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.