Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PBPRA2284Hypothetical glucose kinase; Predicted by orpheus program; predicted by glimmer program. (292 aa)    
Predicted Functional Partners:
HD1852
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
 0.998
NANA
Putative N-acetylneuraminate lyase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.964
PTS18CBA
Putative PTS permease for N-acetylglucosamine and glucose; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
SF1105
Putative PTS system, glucose-specific IIBC; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
S4512
Putative PTS system, trehalose-specific IIBCcomponent; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
Y1767
Putative PTS system, glucose-specific IIBCcomponent; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
T2190
Putative phosphotransferase system IIC components, N-acetylglucosamine-specific IIABC component; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
CV0979
Putative PTS system, glucose-specific IIBC component; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.838
T3657
Putative UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
    
 0.815
Y2631
Putative glucose-1-phosphate uridylyltransferase; Predicted by orpheus program; predicted by glimmer program.
    
 0.813
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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