Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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SF1265Putative phosphoribosylanthranilate isomerase(trpF); Predicted by orpheus program; predicted by glimmer program; Belongs to the TrpC family. (456 aa)    
Predicted Functional Partners:
T1635
Putative anthranilate/para-aminobenzoate synthase component I, TrpE protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.999
S1352
Putative anthranilate synthase component II; Predicted by orpheus program; predicted by glimmer program.
  
 0.999
Z2548
Putative anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 0.999
trpB
Putative tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.999
PLU2467
Putative tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
 
 0.999
PLU0393
Putative para-aminobenzoate synthase glutamine amidotransferase, component II; Predicted by orpheus program; predicted by glimmer program.
  
 0.998
ECS2521
Putative para-aminobenzoate synthase, component I; Predicted by orpheus program; predicted by glimmer program.
 
 0.996
MBTI
Hypothetical anthranilate synthase; Predicted by orpheus program; predicted by glimmer program.
 
 0.995
PP3997
Hypothetical glycosyl transferase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.976
SO0040
Putative shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
 
 0.917
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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