STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
YAEEPutative ABC-type metal ion transport system,permease component; Predicted by orpheus program; predicted by glimmer program. (228 aa)    
Predicted Functional Partners:
SF0190
Putative ABC-type metal ion transportsystem, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
YAEC
Putative lipoprotein YaeC; Predicted by orpheus program; predicted by glimmer program; Belongs to the nlpA lipoprotein family.
 0.999
ALL2459
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.961
C4970
Putative homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
  
    0.833
YAED
Putative histidinol phosphatase-related protein; Predicted by orpheus program; predicted by glimmer program.
       0.637
STM2283
Putative glycerol-3-phosphate transporter; Predicted by orpheus program; predicted by glimmer program.
      
 0.618
SMC02588
Hypohetical ABC transporter, permeaseprotein; Predicted by orpheus program; predicted by glimmer program.
      
 0.618
VP1000
Putative ABC-type arginine transport system, permease component; Predicted by orpheus program; predicted by glimmer program.
      
 0.618
RSC1174
Putative transmembrane ABC transporterprotein; Predicted by orpheus program; predicted by glimmer program.
      
 0.618
T3511
Putative 5,10-methylenetetrahydrofolate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the methylenetetrahydrofolate reductase family.
   
    0.549
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.