STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SF1569Putative glutaminase family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutaminase family. (306 aa)    
Predicted Functional Partners:
C3973
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.952
BH1728
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.952
SCI35.35
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutamine synthetase family.
    
 0.930
PLU0237
Putative glutamate-ammonia ligase; Predicted by orpheus program; predicted by glimmer program.
    
 0.929
MURI
Putative glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.928
SF3253
Putative glutamate synthase, small subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.924
MT3973
Putative glutamate synthase, small subunit; Predicted by orpheus program; predicted by glimmer program.
     
 0.924
MURD
Putative UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
    
 0.920
RSC3301
Putative proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.910
S3959
Putative glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.906
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.