Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
STY4416Putative aspartokinase III, lysine-sensitive; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartokinase family. (459 aa)    
Predicted Functional Partners:
SO3070
Putative aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.991
PSPTO217
Putative aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.988
PSPTO022
Putative diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 0.940
argG
Putative argininosuccinate synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.919
VP2547
Hypothetical aspartokinase; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartokinase family.
  
  
 
0.906
Y1198
Putative asparagine synthetase B, glutamine-hydrolyzing; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.900
VP1719
Putative aspartokinase; Predicted by orpheus program; predicted by glimmer program.
     
  0.900
SF0003
Putative homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 
 0.859
YPO2161
Putative L-asparaginase I; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.842
PYRB
Putative aspartate transcarbamylase catalytic subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
  0.832
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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