STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP2013Hypothetical tetrathionate reductase complex, subunit C; Predicted by orpheus program; predicted by glimmer program. (378 aa)    
Predicted Functional Partners:
BPP1028
Putative tetrathionate reductase, subunit A; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.994
STY1736
Putative tetrathionate reductase, subunit B; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.964
GLPE
Putative thiosulfate sulfurtransferase glpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
    
  0.901
SMC01172
Hypothetical rhodanese-related sulfurtransferase; Predicted by orpheus program; predicted by glimmer program.
    
  0.901
TTRS
Hypothetical histidine kinase; Predicted by orpheus program; predicted by glimmer program.
 
   
 0.841
STY1738
Hypothetical tetrathionate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.791
STM4278
Hypothetical cytochrome c-type protein NrfB precursor; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.704
VV1446
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.637
VP0713
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.611
VC1280
Putative deacetylase DA1; Predicted by orpheus program; predicted by glimmer program.
  
     0.578
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.