STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
STY1736Putative tetrathionate reductase, subunit B; Predicted by orpheus program; predicted by glimmer program. (222 aa)    
Predicted Functional Partners:
BPP1028
Putative tetrathionate reductase, subunit A; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.994
STY1738
Hypothetical tetrathionate reductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.994
VP2013
Hypothetical tetrathionate reductase complex, subunit C; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.964
Y0864
Putative anaerobic dimethyl sulfoxide reductase, subunit A; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.912
SMC01172
Hypothetical rhodanese-related sulfurtransferase; Predicted by orpheus program; predicted by glimmer program.
     
 0.903
GLPE
Putative thiosulfate sulfurtransferase glpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
     
 0.900
SO4515
Hypothetical formate dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.869
BPP1936
Putative formate dehydrogenase, cytochrome B556subunit; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.857
TORA
Putative trimethylamine-N-oxide reductase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.850
STY3956
Putative trimethylamine-N-oxide reductase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.849
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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