STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ0087Hypothetical aspartate ammonia-lyase; Predicted by orpheus program; predicted by glimmer program. (495 aa)    
Predicted Functional Partners:
YPO2161
Putative L-asparaginase I; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.950
Y2787
Putative periplasmic L-asparaginase II; Predicted by orpheus program; predicted by glimmer program; Belongs to the asparaginase 1 family.
  
 
 0.950
S4341
Putative phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
  
 
 0.922
STY4866
Hypothetical aspartate racemase; Predicted by orpheus program; predicted by glimmer program.
   
 0.921
NADB
Putative l-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
   
 0.920
argH
Putative argininosuccinase and n-acetylglutamate synthase; Predicted by orpheus program; predicted by glimmer program; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
     
0.910
PLU4137
Putative aspartate ammonia-lyase; Predicted by orpheus program; predicted by glimmer program.
  
  
 
0.910
T1688
Putative adenylosuccinate lyase; Predicted by orpheus program; predicted by glimmer program; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.905
Y1198
Putative asparagine synthetase B, glutamine-hydrolyzing; Predicted by orpheus program; predicted by glimmer program.
     
 0.901
S4600
Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.901
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.