STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RS00794Putative acyl carrier protein; Predicted by orpheus program; predicted by glimmer program. (85 aa)    
Predicted Functional Partners:
Z4854
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 
 0.994
VV10045
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
   0.970
FABF
Putative 3-oxoacyl-ACP synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.957
ECS4332
Putative 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.957
Z4852
Putative putative phospholipid biosynthesis acyltransferase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.950
RS00767
Putative beta-ketoacyl-ACP synthase; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.936
ECS4331
Hypothetical acyl-coenzyme A synthetase; Predicted by orpheus program; predicted by glimmer program.
 
   
 0.933
RS00790
Putative membrane protein; Predicted by orpheus program; predicted by glimmer program.
 
     0.931
RSP0364
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.930
RS00785
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.930
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.