STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCO5848Putative tagatose 6-phosphate kinase; Predicted by orpheus program; predicted by glimmer program. (428 aa)    
Predicted Functional Partners:
ECS4016
Putative phosphosugar isomerase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.963
CPE2626
Putative aldolase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.916
CPE2626-2
Putative tagatose-bisphosphate aldolase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.916
C2620
Putative tagatose 6-phosphate kinase; Predicted by orpheus program; predicted by glimmer program.
  
  
 
0.903
PFKA
Putative 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     
  0.900
PLU0836
Putative permease protein; Predicted by orpheus program; predicted by glimmer program.
 
    0.851
S3383
Putative PTS transport protein, component 2; Predicted by orpheus program; predicted by glimmer program.
 
    0.829
PLU0178
Putative 2-keto-3-deoxy-6-phosphogluconatealdolase; Predicted by orpheus program; predicted by glimmer program.
     
  0.800
Z4487
Putative PTS permease protein; Predicted by orpheus program; predicted by glimmer program.
 
    0.800
EDA
Putative 4-hydroxy-2-oxoglutaratealdolase/2-deydro-3- deoxyphosphogluconate aldolase; Predicted by orpheus program; predicted by glimmer program.
     
  0.800
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.