STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PP3997Hypothetical glycosyl transferase; Predicted by orpheus program; predicted by glimmer program. (329 aa)    
Predicted Functional Partners:
SF1265
Putative phosphoribosylanthranilate isomerase(trpF); Predicted by orpheus program; predicted by glimmer program; Belongs to the TrpC family.
  
  
 0.976
MBTI
Hypothetical anthranilate synthase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.904
ECS2521
Putative para-aminobenzoate synthase, component I; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.904
T1635
Putative anthranilate/para-aminobenzoate synthase component I, TrpE protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.904
trpB
Putative tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  
 0.881
PLU2467
Putative tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
  
 0.875
PLU0393
Putative para-aminobenzoate synthase glutamine amidotransferase, component II; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.817
S1352
Putative anthranilate synthase component II; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.817
SF3363
Conserved hypothetical protein; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family.
 
    0.669
STM1084
Putative sulfite reductase; Part of a sulfur-relay system.
 
    0.663
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.