node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3920 | CV2853 | PBPRA0616 | PBPRB0212 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | 0.758 |
C3920 | RPL13 | PBPRA0616 | PBPRA3237 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.540 |
C3920 | RPLO | PBPRA0616 | PBPRA0339 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.815 |
C3920 | S4411 | PBPRA0616 | PBPRA0321 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.871 |
C3920 | Y4000 | PBPRA0616 | PBPRA0331 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.554 |
C3920 | YLQF | PBPRA0616 | PBPRB1149 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.504 |
C3920 | rplC | PBPRA0616 | PBPRA0320 | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.908 |
CV2853 | C3920 | PBPRB0212 | PBPRA0616 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.758 |
CV2853 | PBPRB0014 | PBPRB0212 | PBPRB0014 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program. | 0.640 |
CV2853 | RPL13 | PBPRB0212 | PBPRA3237 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.701 |
CV2853 | RPLO | PBPRB0212 | PBPRA0339 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.648 |
CV2853 | S4411 | PBPRB0212 | PBPRA0321 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.661 |
CV2853 | Y4000 | PBPRB0212 | PBPRA0331 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.715 |
CV2853 | YJEF | PBPRB0212 | PBPRA3355 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...] | 0.655 |
CV2853 | YLQF | PBPRB0212 | PBPRB1149 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.723 |
CV2853 | YPO1265 | PBPRB0212 | PBPRA1539 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative ATP-dependent helicase; Predicted by orpheus program; predicted by glimmer program. | 0.629 |
CV2853 | rplC | PBPRB0212 | PBPRA0320 | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | Putative ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.759 |
PBPRB0014 | CV2853 | PBPRB0014 | PBPRB0212 | Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program. | Putative ATP-dependent RNA helicase DbpA; Predicted by orpheus program; predicted by glimmer program; Belongs to the DEAD box helicase family. | 0.640 |
PBPRB0014 | RPL13 | PBPRB0014 | PBPRA3237 | Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program. | Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.939 |
PBPRB0014 | RPLO | PBPRB0014 | PBPRA0339 | Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program. | Putative ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.868 |