STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VHHAPutative phospholipase; Predicted by orpheus program; predicted by glimmer program. (424 aa)    
Predicted Functional Partners:
VV20937
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.727
PBPRB0977
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
   
 0.722
SAV7021
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
      
 0.720
PP4344
Putative flagellar biosynthesis protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
      
 0.716
NE2488
Polar flagellar assembly protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
      
 0.716
VV21676
Putative transport protein, PTR2 family; Predicted by orpheus program; predicted by glimmer program.
  
     0.706
VV12350
Hypothetical lipase activator protein; Predicted by orpheus program; predicted by glimmer program.
  
   
 0.696
VPA0165
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.675
CV0315
Putative oligoendopeptidase F; Predicted by orpheus program; predicted by glimmer program.
  
     0.661
SCRA
Putative ScrA; Predicted by orpheus program; predicted by glimmer program.
  
     0.659
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.