STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HD1253Putative diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (141 aa)    
Predicted Functional Partners:
HD1193
Putative phosphatidate cytidylyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the CDS family.
    
 0.926
PBPRA2215
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
    
 0.910
S3266
Putative 1-acyl-sn-glycerol-3-phosphateacyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.903
PM0103
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.903
CV2714
Putative lactonizing lipase; Predicted by orpheus program; predicted by glimmer program.
     
 0.900
VV0915
Putative predicted metal dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.849
S3621
Hypothetical membrane protein; Predicted by orpheus program; predicted by glimmer program.
 
   
 0.838
PLU4838
Putative glycerol-3-phosphate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.837
GLPD
Putative aerobic glycerol-3-phosphate dehydrogenase; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.802
Y0404
Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit A; Predicted by orpheus program; predicted by glimmer program.
    
  0.802
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.