STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T2190Putative phosphotransferase system IIC components, N-acetylglucosamine-specific IIABC component; Predicted by orpheus program; predicted by glimmer program. (456 aa)    
Predicted Functional Partners:
PLU1392
Putative PTS system, glucose-specific IIAcomponent; Predicted by orpheus program; predicted by glimmer program.
 
 0.997
T1700
Putative ROK family protein; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.
  
 0.985
HD1852
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.942
YFEU
Putative GckR family protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
  
 
 0.942
PTS18CBA
Putative PTS permease for N-acetylglucosamine and glucose; Predicted by orpheus program; predicted by glimmer program.
 
 
0.936
Y1488
Putative phosphocarrier protein HPr; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.934
T2192
Putative N-acetylglucosamine-6-phosphatedeacetylase; Predicted by orpheus program; predicted by glimmer program.
    
 0.930
Y1201
Hypothetical N-acetylglucosamine-6-phosphate deacetylase; Predicted by orpheus program; predicted by glimmer program.
    
 0.930
CHB
Hypothetical N-acetyl-beta-hexosaminidase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.897
PLU1324
Putative beta-N-acetylhexosaminidase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.897
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.