STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGR_L_30Hypothetical glycosyltransferase, probably involved in cell wall biogenesis; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. (743 aa)    
Predicted Functional Partners:
BCSB
Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
 0.989
CELC2
Putative endoglucanase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
  
 0.967
PBPRA1719
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.954
BCSG
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.952
YHJO
Putative cellulose synthase catalytic subunit [UDP-forming]; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
  
 
0.919
Y2631
Putative glucose-1-phosphate uridylyltransferase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.913
SO1665
Putative UTP-glucose-1-phosphateuridylyltransferase, galU; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.913
PBPRA1717
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 
 0.890
PBPRB0303
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.873
CV2676
Hypothetical endoglucanase precursor; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.860
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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