STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Y0864Putative anaerobic dimethyl sulfoxide reductase, subunit A; Predicted by orpheus program; predicted by glimmer program; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa)    
Predicted Functional Partners:
YNFH
Putative anaerobic dimethyl sulfoxide reductase subunit C; Predicted by orpheus program; predicted by glimmer program.
 
 0.980
HD0349
Putative nitrite reductase, Fe-S protein (NrfC); Predicted by orpheus program; predicted by glimmer program.
 
 
 0.915
STY1736
Putative tetrathionate reductase, subunit B; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.912
YNFI
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.867
TORD
Putative torD protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
 
 
 0.849
RS01174
Putative formate dehydrogenase, iron-sulfur subunit; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.828
STM3823
Putative cytochrome c-type protein TorC; Predicted by orpheus program; predicted by glimmer program; Belongs to the TorC/TorY family.
 
 
 0.716
YPO3039
Putative NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.678
PSPTO200
Putative cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.661
YPO3037
Putative periplasmic nitrate reductase,cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.642
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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