Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C4416Putative mannitol-specific IIABC component, PTS system; Predicted by orpheus program; predicted by glimmer program. (650 aa)    
Predicted Functional Partners:
SF3634
Putative mannitol-1-phosphate 5-dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.999
Y1488
Putative phosphocarrier protein HPr; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.989
FRUB
Putative PTS system, fructose-specific IIA/FPR component; Predicted by orpheus program; predicted by glimmer program.
 
 
0.987
VVA0188
Putative PTS system, fructose-specific IIABC component; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.986
VVA0192
Putative PTS system, fructose-specific IIABC component; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.985
PBPRA2718
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.971
PBPRB0217
Hypothetical phosphoenolpyruvate-protein phosphotransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the PEP-utilizing enzyme family.
 
 
 0.969
SF2252
PTS system, fructose-specific IIBC component; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.960
PBPRB1516
Hypothetical altronate oxidoreductase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.947
Y2903
Putative mannonate oxidoreductase; Predicted by orpheus program; predicted by glimmer program; Belongs to the mannitol dehydrogenase family.
 
  
 0.946
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.